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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3391

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TGM2 HGNC:11778 (HGNC)
7052 (Entrez Gene)
190196 (OMIM)
Chr20 q12 Chr20:38128461-38165298 (-)
GRCh38
P21980 (UniProt | EBI)
NM_004613 (RefSeq)
mouse Tgm2 MGI:98731 (MGI)
21817 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 78.72 cM Chr2:158116402-158146436 (-)
GRCm38
Maturity-Onset Diabetes of the Young; MODY
OTTMUSG00000015888 (VEGA)
OTTMUSP00000016945 (VEGA)
OTTMUST00000037773 (VEGA)
rat Tgm2 56083 (Entrez Gene)
Chr3 q42 NP_062259 (RefSeq)
NM_019386 (RefSeq)
chimpanzee TGM2 469937 (Entrez Gene)
Chr20 XP_001144553 (RefSeq)
cattle TGM2 281528 (Entrez Gene)
Chr13 P51176 (UniProt | EBI)
NM_177507 (RefSeq)
dog TGM2 485867 (Entrez Gene)
Chr24 XP_542991 (RefSeq)
chicken TGM2 396432 (Entrez Gene)
Chr20 Q01841 (UniProt | EBI)
NM_205448 (RefSeq)
western clawed frog tgm2 100170618 (Entrez Gene)
ChrUN NP_001123852 (RefSeq)
NM_001130380 (RefSeq)
zebrafish tgm2b 323856 (Entrez Gene)
Chr6 NP_997821 (RefSeq)
NM_212656 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory