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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
3389

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TBX6 HGNC:11605 (HGNC)
6911 (Entrez Gene)
602427 (OMIM)
Chr16 p11.2 Chr16:30085793-30091937 (-)
GRCh38
O95947 (UniProt | EBI)
NM_004608 (RefSeq)
mouse Tbx6 MGI:102539 (MGI)
21389 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 69.25 cM Chr7:126781483-126785560 (+)
GRCm38
Spondylocostal Dysostosis 1, Autosomal Recessive; SCDO1
OTTMUSG00000037609 (VEGA)
OTTMUSP00000054296 (VEGA)
OTTMUST00000097001 (VEGA)
rat Tbx6 365371 (Entrez Gene)
Chr1 q36 D3ZJK7 (UniProt | EBI)
NM_001108920 (RefSeq)
chimpanzee TBX6 467944 (Entrez Gene)
Chr16 XP_523337 (RefSeq)
rhesus macaque TBX6 710353 (Entrez Gene)
Chr20 XP_001098963 (RefSeq)
cattle TBX6 526448 (Entrez Gene)
Chr25 E1BEA8 (UniProt | EBI)
NM_001192630 (RefSeq)
dog TBX6 489948 (Entrez Gene)
Chr6 XP_547068 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory