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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3364

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PKP2 HGNC:9024 (HGNC)
5318 (Entrez Gene)
602861 (OMIM)
Chr12 p11 Chr12:32790746-32896846 (-)
GRCh38
Arrhythmogenic Right Ventricular Dysplasia, Familial, 9; ARVD9
Q99959 (UniProt | EBI)
NM_001005242 (RefSeq)
mouse Pkp2 MGI:1914701 (MGI)
67451 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 10.09 cM Chr16:16213318-16272712 (+)
GRCm38
OTTMUSG00000021016 (VEGA)
OTTMUSP00000023065 (VEGA)
OTTMUST00000049682 (VEGA)
rat Pkp2 287925 (Entrez Gene)
Chr11 q23 NP_001093969 (RefSeq)
NM_001100499 (RefSeq)
chimpanzee PKP2 465265 (Entrez Gene)
Chr12 XP_003954415 (RefSeq)
cattle PKP2 537784 (Entrez Gene)
Chr5 NP_001077198 (RefSeq)
NM_001083729 (RefSeq)
dog PKP2 486613 (Entrez Gene)
Chr27 XP_543739 (RefSeq)
chicken PKP2 418130 (Entrez Gene)
Chr1 XP_416362 (RefSeq)
western clawed frog pkp2 100124891 (Entrez Gene)
ChrUN NP_001096312 (RefSeq)
NM_001102842 (RefSeq)
zebrafish pkp2 568060 (Entrez Gene)
Chr4 NP_001106904 (RefSeq)
NM_001113433 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory