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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3363

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PKNOX1 HGNC:9022 (HGNC)
5316 (Entrez Gene)
602100 (OMIM)
Chr21 q22.3 Chr21:42974510-43033931 (+)
GRCh38
P55347 (UniProt | EBI)
NM_004571 (RefSeq)
mouse Pknox1 MGI:1201409 (MGI)
18771 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 16.78 cM Chr17:31564749-31607684 (+)
GRCm38
OTTMUSG00000040106 (VEGA)
OTTMUSP00000058286 (VEGA)
OTTMUST00000104193 (VEGA)
rat Pknox1 294322 (Entrez Gene)
Chr20 p12 NP_001013092 (RefSeq)
NM_001013074 (RefSeq)
chimpanzee PKNOX1 458587 (Entrez Gene)
Chr21 XP_001142111 (RefSeq)
rhesus macaque PKNOX1 714108 (Entrez Gene)
Chr3 NP_001248218 (RefSeq)
NM_001261289 (RefSeq)
dog PKNOX1 611059 (Entrez Gene)
Chr31 XP_853779 (RefSeq)
chicken PKNOX1 418542 (Entrez Gene)
Chr1 XP_416750 (RefSeq)
zebrafish LOC100536256 100536256 (Entrez Gene)
Chr9 XP_003199243 (RefSeq)
pknox1.1 798151 (Entrez Gene)
Chr9 NP_571966 (RefSeq)
NM_131891 (RefSeq)
pknox1.2 170445 (Entrez Gene)
Chr1 XP_707868 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory