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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
3329

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MMP2 HGNC:7166 (HGNC)
4313 (Entrez Gene)
120360 (OMIM)
Chr16 q13-q21 Chr16:55479169-55506674 (+)
GRCh38
Multicentric Osteolysis, Nodulosis, and Arthropathy; MONA
P08253 (UniProt | EBI)
NM_004530 (RefSeq)
mouse Mmp2 MGI:97009 (MGI)
17390 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 44.99 cM Chr8:92827328-92853417 (+)
GRCm38
Multicentric Osteolysis, Nodulosis, and Arthropathy; MONA
ENSMUSG00000031740 (Ensembl Gene Model)
ENSMUSP00000034187 (Ensembl)
ENSMUST00000034187 (Ensembl)
rat Mmp2 81686 (Entrez Gene)
Chr19 p11 P33436 (UniProt | EBI)
NM_031054 (RefSeq)
chimpanzee MMP2 454094 (Entrez Gene)
Chr16 XP_001167520 (RefSeq)
rhesus macaque MMP2 698478 (Entrez Gene)
Chr20 XP_001087335 (RefSeq)
cattle MMP2 282872 (Entrez Gene)
Chr18 Q9GLE5 (UniProt | EBI)
NM_174745 (RefSeq)
dog MMP2 403733 (Entrez Gene)
Chr2 XP_535300 (RefSeq)
chicken MMP2 386583 (Entrez Gene)
Chr11 Q90611 (UniProt | EBI)
NM_204420 (RefSeq)
zebrafish mmp2 337179 (Entrez Gene)
Chr7 NP_932333 (RefSeq)
NM_198067 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory