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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
33184

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LRRC30 HGNC:30219 (HGNC)
339291 (Entrez Gene)
HGNC homology
Chr18 p11.23 Chr18:7231139-7232044 (+)
GRCh38.p7
A6NM36 (UniProt | EBI)
NM_001105581 (RefSeq)
mouse Lrrc30 MGI:2685172 (MGI)
240131 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr17 38.8 cM Chr17:67630965-67632723 (-)
GRCm38
240131 (NCBI Gene Model)
Q3UV48 (UniProt | EBI)
NM_001033340 (RefSeq)
rat Lrrc30 301711 (Entrez Gene)
Chr9 q38 XP_237538 (RefSeq)
chimpanzee LRRC30 468482 (Entrez Gene)
Chr18 XP_009431943 (RefSeq)
cattle LRRC30 527341 (Entrez Gene)
Chr24 NP_001095980 (RefSeq)
NM_001102510 (RefSeq)
dog LRRC30 490544 (Entrez Gene)
Chr7 XP_022277321 (RefSeq)
chicken LRRC30 769685 (Entrez Gene)
Chr2 XP_004939806 (RefSeq)
zebrafish LOC100534875 100534875 (Entrez Gene)
ChrUN XP_003198027 (RefSeq)
frog, western clawed lrrc30 101730546 (Entrez Gene)
Chr6 XP_004915719 (RefSeq)
macaque, rhesus LRRC30 722462 (Entrez Gene)
Chr18 XP_028693829 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory