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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FOXA1 HGNC:5021 (HGNC)
3169 (Entrez Gene)
602294 (OMIM)
FOXA1 (MyGene.info)
HGNC homology
Chr14 q21.1 Chr14:37589552-37595120 (-)
P55317 (UniProt | EBI)
NM_004496 (RefSeq)
mouse Foxa1 MGI:1347472 (MGI)
15375 (Entrez Gene)
Gene Tree
HGNC homology
Chr12 24.7 cM Chr12:57540628-57546916 (-)
ENSMUSG00000035451 (Ensembl Gene Model)
ENSMUSP00000041118 (Ensembl)
ENSMUST00000044380 (Ensembl)
rat Foxa1 25098 (Entrez Gene)
Chr6 q23 P23512 (UniProt | EBI)
NM_012742 (RefSeq)
chimpanzee FOXA1 737693 (Entrez Gene)
Chr14 XP_001144389 (RefSeq)
cattle FOXA1 503579 (Entrez Gene)
Chr21 NP_001192958 (RefSeq)
NM_001206029 (RefSeq)
dog FOXA1 490657 (Entrez Gene)
Chr8 XP_852354 (RefSeq)
zebrafish foxa1 30541 (Entrez Gene)
Chr17 NP_571359 (RefSeq)
NM_131284 (RefSeq)
frog, western clawed foxa1 395059 (Entrez Gene)
Chr8 Q8AWH1 (UniProt | EBI)
NM_204088 (RefSeq)
macaque, rhesus FOXA1 697909 (Entrez Gene)
Chr7 XP_014999082 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory