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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3285

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GPC5 HGNC:4453 (HGNC)
2262 (Entrez Gene)
602446 (OMIM)
Glypican 5 (MyGene.info)
HGNC homology
Chr13 q31.3 Chr13:91398619-92867237 (+)
GRCh38.p7
P78333 (UniProt | EBI)
NM_004466 (RefSeq)
mouse Gpc5 MGI:1194894 (MGI)
103978 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr14 59.43 cM Chr14:115092215-116525179 (+)
GRCm38
ENSMUSG00000022112 (Ensembl Gene Model)
ENSMUSP00000135085 (Ensembl)
ENSMUST00000176912 (Ensembl)
rat Gpc5 306157 (Entrez Gene)
Chr15 q23-q24 NP_001100755 (RefSeq)
NM_001107285 (RefSeq)
chimpanzee GPC5 452619 (Entrez Gene)
Chr13 XP_509696 (RefSeq)
cattle GPC5 522828 (Entrez Gene)
Chr12 NP_001095540 (RefSeq)
NM_001102070 (RefSeq)
dog GPC5 485518 (Entrez Gene)
Chr22 XP_022263801 (RefSeq)
chicken GPC5 418795 (Entrez Gene)
Chr1 XP_025002526 (RefSeq)
zebrafish gpc5a 559454 (Entrez Gene)
Chr1 NP_001289165 (RefSeq)
NM_001302236 (RefSeq)
macaque, rhesus GPC5 100428701 (Entrez Gene)
Chr17 XP_028693038 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory