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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
328

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human APOB HGNC:603 (HGNC)
338 (Entrez Gene)
Chr2 p24-p23 Chr2:21001429-21044073 (-)
GRCh38
Hypercholesterolemia, Autosomal Dominant, Type B
Hypobetalipoproteinemia, Familial, 1; FHBL1
P04114 (UniProt | EBI)
NM_000384 (RefSeq)
mouse Apob MGI:88052 (MGI)
238055 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 3.53 cM Chr12:7977648-8016835 (+)
GRCm38
Apolipoprotein B; APOB
Hypobetalipoproteinemia, Familial, 2; FHBL2
OTTMUSG00000035465 (VEGA)
OTTMUSP00000049845 (VEGA)
OTTMUST00000090769 (VEGA)
rat Apob 54225 (Entrez Gene)
Chr6 q14 Q7TMA5 (UniProt | EBI)
NM_019287 (RefSeq)
chimpanzee APOB 459058 (Entrez Gene)
Chr2A XP_515323 (RefSeq)
rhesus macaque APOB 702937 (Entrez Gene)
Chr13 XP_001097404 (RefSeq)
dog APOB 475680 (Entrez Gene)
Chr17 XP_005630653 (RefSeq)
chicken APOB 396535 (Entrez Gene)
Chr3 P11682 (UniProt | EBI)
NM_001044633 (RefSeq)
western clawed frog apob 100498048 (Entrez Gene)
ChrUN XP_002934538 (RefSeq)
zebrafish apoba 566465 (Entrez Gene)
Chr17 XP_694827 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory