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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
32544

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SIL1 HGNC:24624 (HGNC)
64374 (Entrez Gene)
608005 (OMIM)
Chr5 q31 Chr5:138946720-139198376 (-)
GRCh38
Marinesco-Sjogren Syndrome; MSS
Q9H173 (UniProt | EBI)
NM_022464 (RefSeq)
mouse Sil1 MGI:1932040 (MGI)
81500 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 18.97 cM Chr18:35266400-35498925 (-)
GRCm38
Marinesco-Sjogren Syndrome; MSS
ENSMUSG00000024357 (Ensembl Gene Model)
ENSMUSP00000025215 (Ensembl)
ENSMUST00000025215 (Ensembl)
rat Sil1 291673 (Entrez Gene)
Chr18 p11 Q6P6S4 (UniProt | EBI)
NM_199376 (RefSeq)
chimpanzee SIL1 747459 (Entrez Gene)
Chr5 NP_001267328 (RefSeq)
NM_001280399 (RefSeq)
rhesus macaque SIL1 714762 (Entrez Gene)
Chr6 XP_001114077 (RefSeq)
cattle SIL1 520650 (Entrez Gene)
Chr7 Q32KV6 (UniProt | EBI)
NM_001075808 (RefSeq)
dog SIL1 474699 (Entrez Gene)
Chr11 XP_531925 (RefSeq)
chicken SIL1 416185 (Entrez Gene)
Chr13 XP_414514 (RefSeq)
zebrafish LOC568308 568308 (Entrez Gene)
Chr14 XP_696722 (RefSeq)
LOC100334837 100334837 (Entrez Gene)
Chr14 XP_002664491 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory