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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC5A7 HGNC:14025 (HGNC)
60482 (Entrez Gene)
608761 (OMIM)
Choline transporter (MyGene.info)
HGNC homology
Chr2 q12.3 Chr2:107986514-108014497 (+)
congenital myasthenic syndrome 20
distal hereditary motor neuronopathy type 7A
Q9GZV3 (UniProt | EBI)
NM_001305006 (RefSeq)
mouse Slc5a7 MGI:1927126 (MGI)
63993 (Entrez Gene)
Gene Tree
HGNC homology
Chr17 28.23 cM Chr17:54273590-54299034 (-)
ENSMUSG00000023945 (Ensembl Gene Model)
ENSMUSP00000093379 (Ensembl)
ENSMUST00000095712 (Ensembl)
rat Slc5a7 85426 (Entrez Gene)
Chr9 q11 Q9JMD7 (UniProt | EBI)
NM_053521 (RefSeq)
chimpanzee SLC5A7 470492 (Entrez Gene)
Chr2A XP_001165105 (RefSeq)
cattle SLC5A7 512311 (Entrez Gene)
Chr11 NP_001039581 (RefSeq)
NM_001046116 (RefSeq)
dog SLC5A7 481311 (Entrez Gene)
Chr10 XP_538432 (RefSeq)
chicken SLC5A7 414870 (Entrez Gene)
Chr1 NP_001001763 (RefSeq)
NM_001001763 (RefSeq)
zebrafish LOC799259 799259 (Entrez Gene)
Chr9 XP_001339635 (RefSeq)
slc5a7a 100005589 (Entrez Gene)
Chr1 XP_001344597 (RefSeq)
frog, western clawed slc5a7 100490609 (Entrez Gene)
Chr2 XP_004911834 (RefSeq)
macaque, rhesus SLC5A7 714093 (Entrez Gene)
Chr13 XP_014968551 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory