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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32513

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AP4S1 HGNC:575 (HGNC)
11154 (Entrez Gene)
607243 (OMIM)
Chr14 q12 Chr14:31025106-31096450 (+)
GRCh38
Spastic Paraplegia 52, Autosomal Recessive; SPG52
Q9Y587 (UniProt | EBI)
NM_007077 (RefSeq)
mouse Ap4s1 MGI:1337065 (MGI)
11782 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 22.11 cM Chr12:51690966-51738939 (+)
GRCm38
11782 (NCBI Gene Model)
Q9WVL1 (UniProt | EBI)
NM_021710 (RefSeq)
rat Ap4s1 366618 (Entrez Gene)
Chr6 q22 NP_001124471 (RefSeq)
NM_001130999 (RefSeq)
chimpanzee AP4S1 467417 (Entrez Gene)
Chr14 XP_001171154 (RefSeq)
cattle AP4S1 618267 (Entrez Gene)
Chr21 Q3ZBB6 (UniProt | EBI)
NM_001040603 (RefSeq)
dog AP4S1 480283 (Entrez Gene)
Chr8 XP_850275 (RefSeq)
chicken AP4S1 423309 (Entrez Gene)
Chr5 XP_003641449 (RefSeq)
zebrafish ap4s1 368852 (Entrez Gene)
Chr17 NP_001003826 (RefSeq)
NM_001003826 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory