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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32393

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMG8 HGNC:25551 (HGNC)
55181 (Entrez Gene)
613175 (OMIM)
HGNC homology
Chr17 q22 Chr17:59210010-59215250 (+)
GRCh38.p7
Q8ND04 (UniProt | EBI)
NM_018149 (RefSeq)
mouse Smg8 MGI:1921383 (MGI)
74133 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 51.89 cM Chr11:87077732-87086774 (-)
GRCm38
ENSMUSG00000020495 (Ensembl Gene Model)
ENSMUSP00000020801 (Ensembl)
ENSMUST00000020801 (Ensembl)
rat Smg8 287596 (Entrez Gene)
Chr10 q26 XP_213430 (RefSeq)
chimpanzee SMG8 468293 (Entrez Gene)
Chr17 XP_523682 (RefSeq)
cattle SMG8 522040 (Entrez Gene)
Chr19 A1A4J7 (UniProt | EBI)
NM_001080286 (RefSeq)
dog SMG8 491116 (Entrez Gene)
Chr9 XP_548236 (RefSeq)
chicken SMG8 417630 (Entrez Gene)
Chr19 XP_415875 (RefSeq)
zebrafish smg8 567424 (Entrez Gene)
Chr10 XP_695811 (RefSeq)
frog, western clawed smg8 779744 (Entrez Gene)
Chr2 Q0VA04 (UniProt | EBI)
NM_001078823 (RefSeq)
macaque, rhesus SMG8 711172 (Entrez Gene)
Chr16 NP_001181314 (RefSeq)
NM_001194385 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory