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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRPF39 HGNC:20314 (HGNC)
55015 (Entrez Gene)
614907 (OMIM)
HGNC homology
Chr14 q21.2 Chr14:45084099-45115601 (+)
Q86UA1 (UniProt | EBI)
NM_018333 (RefSeq)
mouse Prpf39 MGI:104602 (MGI)
328110 (Entrez Gene)
Gene Tree
HGNC homology
Chr12 27.21 cM Chr12:65036334-65063386 (+)
328110 (NCBI Gene Model)
Q8K2Z2 (UniProt | EBI)
NM_001374213 (RefSeq)
rat Prpf39 314171 (Entrez Gene)
Chr6 q24 NP_001101496 (RefSeq)
NM_001108026 (RefSeq)
chimpanzee PRPF39 739795 (Entrez Gene)
Chr14 XP_009426030 (RefSeq)
cattle PRPF39 505547 (Entrez Gene)
Chr21 NP_001103259 (RefSeq)
NM_001109789 (RefSeq)
dog PRPF39 480305 (Entrez Gene)
Chr8 XP_038464673 (RefSeq)
chicken PRPF39 100858094 (Entrez Gene)
Chr5 XP_015132270 (RefSeq)
zebrafish prpf39 368864 (Entrez Gene)
Chr20 Q1JPZ7 (UniProt | EBI)
NM_001004520 (RefSeq)
macaque, rhesus PRPF39 702306 (Entrez Gene)
Chr7 XP_028707362 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.16
The Jackson Laboratory