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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
32339

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human EFEMP2 HGNC:3219 (HGNC)
30008 (Entrez Gene)
604633 (OMIM)
Chr11 q13.1 Chr11:65866441-65872934 (-)
GRCh38
Cutis Laxa, Autosomal Recessive, Type IB; ARCL1B
O95967 (UniProt | EBI)
NM_016938 (RefSeq)
mouse Efemp2 MGI:1891209 (MGI)
58859 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 4.33 cM Chr19:5473973-5481853 (+)
GRCm38
OTTMUSG00000036759 (VEGA)
OTTMUSP00000052424 (VEGA)
OTTMUST00000094317 (VEGA)
chimpanzee EFEMP2 451335 (Entrez Gene)
Chr11 XP_508563 (RefSeq)
rhesus macaque EFEMP2 721877 (Entrez Gene)
Chr14 XP_001118071 (RefSeq)
cattle EFEMP2 535222 (Entrez Gene)
Chr29 NP_001069517 (RefSeq)
NM_001076049 (RefSeq)
dog EFEMP2 476020 (Entrez Gene)
Chr18 XP_533229 (RefSeq)
zebrafish efemp2a 494044 (Entrez Gene)
Chr14 NP_001008587 (RefSeq)
NM_001008587 (RefSeq)
efemp2b 572703 (Entrez Gene)
Chr21 NP_001153830 (RefSeq)
NM_001160358 (RefSeq)
LOC100537581 100537581 (Entrez Gene)
Chr21 XP_003200899 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory