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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32282

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCF11 HGNC:30097 (HGNC)
51585 (Entrez Gene)
608876 (OMIM)
HGNC homology
Chr11 q14.1 Chr11:83157095-83185794 (+)
GRCh38.p7
O94913 (UniProt | EBI)
NM_015885 (RefSeq)
mouse Pcf11 MGI:1919579 (MGI)
74737 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 51.56 cM Chr7:92643543-92669934 (-)
GRCm38
ENSMUSG00000041328 (Ensembl Gene Model)
ENSMUSP00000113717 (Ensembl)
ENSMUST00000119954 (Ensembl)
rat Pcf11 361605 (Entrez Gene)
Chr1 q32 XP_008772849 (RefSeq)
chimpanzee PCF11 451458 (Entrez Gene)
Chr11 XP_016777937 (RefSeq)
cattle PCF11 510604 (Entrez Gene)
Chr29 XP_024843318 (RefSeq)
dog PCF11 476786 (Entrez Gene)
Chr21 XP_022263152 (RefSeq)
chicken PCF11 419021 (Entrez Gene)
Chr1 XP_004938950 (RefSeq)
zebrafish pcf11 492341 (Entrez Gene)
Chr21 NP_001007308 (RefSeq)
NM_001007307 (RefSeq)
macaque, rhesus PCF11 704490 (Entrez Gene)
Chr14 XP_014970832 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
07/07/2020
MGI 6.15
The Jackson Laboratory