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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32203

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OSTM1 HGNC:21652 (HGNC)
28962 (Entrez Gene)
607649 (OMIM)
Chr6 q21 Chr6:108041409-108074737 (-)
GRCh38
Osteopetrosis, Autosomal Recessive 5; OPTB5
Q86WC4 (UniProt | EBI)
NM_014028 (RefSeq)
mouse Ostm1 MGI:2655574 (MGI)
14628 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 22.89 cM Chr10:42583822-42702459 (+)
GRCm38
Osteopetrosis, Autosomal Recessive 5; OPTB5
OTTMUSG00000019462 (VEGA)
OTTMUSP00000020987 (VEGA)
OTTMUST00000046478 (VEGA)
rat Ostm1 499474 (Entrez Gene)
Chr20 q13 NP_001025096 (RefSeq)
NM_001029925 (RefSeq)
chimpanzee OSTM1 739203 (Entrez Gene)
Chr6 XP_001148469 (RefSeq)
rhesus macaque OSTM1 701341 (Entrez Gene)
Chr4 NP_001248677 (RefSeq)
NM_001261748 (RefSeq)
cattle OSTM1 518522 (Entrez Gene)
Chr9 NP_001069244 (RefSeq)
NM_001075776 (RefSeq)
dog OSTM1 612165 (Entrez Gene)
Chr12 XP_854990 (RefSeq)
chicken OSTM1 421773 (Entrez Gene)
Chr3 NP_001026248 (RefSeq)
NM_001031077 (RefSeq)
western clawed frog ostm1 780037 (Entrez Gene)
ChrUN NP_001072582 (RefSeq)
NM_001079114 (RefSeq)
zebrafish ostm1 100320445 (Entrez Gene)
Chr20 XP_002665788 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory