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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3214

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCR6 HGNC:1607 (HGNC)
1235 (Entrez Gene)
601835 (OMIM)
Chr6 q27 Chr6:167111807-167139141 (+)
GRCh38
P51684 (UniProt | EBI)
NM_004367 (RefSeq)
mouse Ccr6 MGI:1333797 (MGI)
12458 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 4.9 cM Chr17:8236043-8257127 (+)
GRCm38
ENSMUSG00000040899 (Ensembl Gene Model)
ENSMUSP00000131153 (Ensembl)
ENSMUST00000164411 (Ensembl)
rat Ccr6 308163 (Entrez Gene)
Chr1 q11 NP_001013163 (RefSeq)
NM_001013145 (RefSeq)
chimpanzee CCR6 100612069 (Entrez Gene)
Chr6 XP_003311630 (RefSeq)
rhesus macaque CCR6 574335 (Entrez Gene)
Chr4 NP_001028107 (RefSeq)
NM_001032935 (RefSeq)
cattle CCR6 519716 (Entrez Gene)
Chr9 NP_001181890 (RefSeq)
NM_001194961 (RefSeq)
dog CCR6 484080 (Entrez Gene)
Chr1 XP_541197 (RefSeq)
chicken CCR6 769278 (Entrez Gene)
Chr3 NP_001107553 (RefSeq)
NM_001114081 (RefSeq)
western clawed frog ccr6 100492892 (Entrez Gene)
ChrUN XP_002935872 (RefSeq)
zebrafish ccr6a 558616 (Entrez Gene)
Chr20 NP_001093461 (RefSeq)
NM_001099991 (RefSeq)
ccr6b 336944 (Entrez Gene)
Chr17 XP_002665313 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory