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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32130

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VNN1 HGNC:12705 (HGNC)
8876 (Entrez Gene)
603570 (OMIM)
Chr6 q23-q24 Chr6:132680858-132714055 (-)
GRCh38
Vanin 1; VNN1
O95497 (UniProt | EBI)
NM_004666 (RefSeq)
mouse Vnn1 MGI:108395 (MGI)
22361 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 11.33 cM Chr10:23894688-23905343 (+)
GRCm38
OTTMUSG00000044612 (VEGA)
OTTMUSP00000065632 (VEGA)
OTTMUST00000117358 (VEGA)
rat Vnn1 29142 (Entrez Gene)
Chr1 p12 NP_001020794 (RefSeq)
NM_001025623 (RefSeq)
chimpanzee LOC746544 746544 (Entrez Gene)
Chr6 XP_001169280 (RefSeq)
rhesus macaque VNN1 708830 (Entrez Gene)
Chr4 XP_001102153 (RefSeq)
cattle VNN1 526704 (Entrez Gene)
Chr9 Q58CQ9 (UniProt | EBI)
NM_001024556 (RefSeq)
dog VNN1 442973 (Entrez Gene)
Chr1 Q9TSX8 (UniProt | EBI)
NM_001003372 (RefSeq)
chicken VNN1 421702 (Entrez Gene)
Chr3 NP_001034377 (RefSeq)
NM_001039288 (RefSeq)
western clawed frog vnn1 496642 (Entrez Gene)
ChrUN XP_004914646 (RefSeq)
vnn2 496713 (Entrez Gene)
ChrUN NP_001011263 (RefSeq)
NM_001011263 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory