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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32121

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SDF4 HGNC:24188 (HGNC)
51150 (Entrez Gene)
614282 (OMIM)
SDF4 (MyGene.info)
HGNC homology
Chr1 p36.33 Chr1:1216908-1232067 (-)
GRCh38.p7
Q9BRK5 (UniProt | EBI)
NM_016547 (RefSeq)
mouse Sdf4 MGI:108079 (MGI)
20318 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 87.66 cM Chr4:155992872-156013610 (+)
GRCm38
ENSMUSG00000029076 (Ensembl Gene Model)
ENSMUSP00000101204 (Ensembl)
ENSMUST00000105579 (Ensembl)
rat Sdf4 155173 (Entrez Gene)
Chr5 q36 Q91ZS3 (UniProt | EBI)
NM_130412 (RefSeq)
cattle SDF4 528783 (Entrez Gene)
Chr16 Q3ZBZ1 (UniProt | EBI)
NM_001035375 (RefSeq)
dog SDF4 479572 (Entrez Gene)
Chr5 XP_005620429 (RefSeq)
chicken SDF4 419423 (Entrez Gene)
Chr21 Q5ZKE5 (UniProt | EBI)
NM_001006302 (RefSeq)
zebrafish sdf4 406360 (Entrez Gene)
Chr23 Q7ZUC2 (UniProt | EBI)
NM_213087 (RefSeq)
frog, western clawed sdf4 594970 (Entrez Gene)
Chr7 Q5BKL9 (UniProt | EBI)
NM_001030411 (RefSeq)
macaque, rhesus SDF4 699804 (Entrez Gene)
Chr1 XP_014972597 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory