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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32115

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PIKFYVE HGNC:23785 (HGNC)
200576 (Entrez Gene)
609414 (OMIM)
Chr2 q34 Chr2:208266267-208358751 (+)
GRCh38
Corneal Dystrophy, Fleck
Q9Y2I7 (UniProt | EBI)
NM_015040 (RefSeq)
mouse Pikfyve MGI:1335106 (MGI)
18711 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 32.94 cM Chr1:65186683-65278695 (+)
GRCm38
OTTMUSG00000047694 (VEGA)
OTTMUSP00000067278 (VEGA)
OTTMUST00000122904 (VEGA)
rat Pikfyve 316457 (Entrez Gene)
Chr9 q32 XP_006226916 (RefSeq)
chimpanzee PIKFYVE 459908 (Entrez Gene)
Chr2B XP_516057 (RefSeq)
rhesus macaque PIKFYVE 710115 (Entrez Gene)
Chr12 XP_001108540 (RefSeq)
cattle PIKFYVE 790873 (Entrez Gene)
Chr2 NP_001192396 (RefSeq)
NM_001205467 (RefSeq)
dog PIKFYVE 478890 (Entrez Gene)
Chr37 XP_536048 (RefSeq)
chicken PIKFYVE 424114 (Entrez Gene)
Chr7 XP_421967 (RefSeq)
zebrafish pikfyve 337690 (Entrez Gene)
Chr9 NP_001120777 (RefSeq)
NM_001127305 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory