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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32089

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GAMT HGNC:4136 (HGNC)
2593 (Entrez Gene)
601240 (OMIM)
Chr19 p13.3 Chr19:1397026-1401570 (-)
GRCh38
Cerebral Creatine Deficiency Syndrome 2; CCDS2
Q14353 (UniProt | EBI)
NM_000156 (RefSeq)
mouse Gamt MGI:1098221 (MGI)
14431 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 39.72 cM Chr10:80258151-80261012 (-)
GRCm38
Cerebral Creatine Deficiency Syndrome 2; CCDS2
OTTMUSG00000000008 (VEGA)
OTTMUSP00000020612 (VEGA)
OTTMUST00000045772 (VEGA)
rat Gamt 25257 (Entrez Gene)
Chr7 q11 P10868 (UniProt | EBI)
NM_012793 (RefSeq)
chimpanzee GAMT 749982 (Entrez Gene)
Chr19 XP_001172605 (RefSeq)
rhesus macaque GAMT 721263 (Entrez Gene)
Chr19 NP_001248061 (RefSeq)
NM_001261132 (RefSeq)
cattle GAMT 515270 (Entrez Gene)
Chr7 Q2TBQ3 (UniProt | EBI)
NM_001038544 (RefSeq)
western clawed frog gamt 394491 (Entrez Gene)
ChrUN Q6PBF6 (UniProt | EBI)
NM_203565 (RefSeq)
zebrafish gamt 796865 (Entrez Gene)
Chr11 Q71N41 (UniProt | EBI)
NM_001105595 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory