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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
31426

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human USF1 HGNC:12593 (HGNC)
7391 (Entrez Gene)
191523 (OMIM)
Chr1 q22-q23 Chr1:161039251-161045979 (-)
GRCh38
Hyperlipidemia, Combined, 1
P22415 (UniProt | EBI)
NM_007122 (RefSeq)
mouse Usf1 MGI:99542 (MGI)
22278 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 79.4 cM Chr1:171411313-171419142 (+)
GRCm38
OTTMUSG00000030990 (VEGA)
OTTMUSP00000040457 (VEGA)
OTTMUST00000076757 (VEGA)
rat Usf1 83586 (Entrez Gene)
Chr13 q24 NP_113965 (RefSeq)
NM_031777 (RefSeq)
chimpanzee USF1 457443 (Entrez Gene)
Chr1 XP_003949666 (RefSeq)
rhesus macaque USF1 719835 (Entrez Gene)
Chr1 XP_001117703 (RefSeq)
cattle USF1 407239 (Entrez Gene)
Chr3 Q6XBT4 (UniProt | EBI)
NM_001001161 (RefSeq)
dog USF1 488646 (Entrez Gene)
Chr38 XP_545763 (RefSeq)
chicken USF1 425126 (Entrez Gene)
ChrUN NP_001007486 (RefSeq)
NM_001007485 (RefSeq)
zebrafish usf1 393266 (Entrez Gene)
Chr15 NP_956590 (RefSeq)
NM_200296 (RefSeq)
usf1l 406475 (Entrez Gene)
Chr5 NP_998359 (RefSeq)
NM_213194 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory