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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
31399

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRAFD1 HGNC:24808 (HGNC)
10906 (Entrez Gene)
613197 (OMIM)
TRAFD1 (MyGene.info)
HGNC homology
Chr12 q24.13 Chr12:112125545-112153604 (+)
GRCh38.p7
O14545 (UniProt | EBI)
NM_001143906 (RefSeq)
mouse Trafd1 MGI:1923551 (MGI)
231712 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 61.78 cM Chr5:121371725-121385632 (-)
GRCm38
ENSMUSG00000042726 (Ensembl Gene Model)
ENSMUSP00000047475 (Ensembl)
ENSMUST00000042312 (Ensembl)
rat Trafd1 114635 (Entrez Gene)
Chr12 q16 Q99MM4 (UniProt | EBI)
NM_053760 (RefSeq)
chimpanzee TRAFD1 452259 (Entrez Gene)
Chr12 XP_024203831 (RefSeq)
cattle TRAFD1 512642 (Entrez Gene)
Chr17 Q58D05 (UniProt | EBI)
NM_001014908 (RefSeq)
dog TRAFD1 477484 (Entrez Gene)
Chr26 XP_022265960 (RefSeq)
chicken TRAFD1 416884 (Entrez Gene)
Chr15 NP_001006191 (RefSeq)
NM_001006191 (RefSeq)
zebrafish trafd1 100037363 (Entrez Gene)
Chr5 NP_001082984 (RefSeq)
NM_001089515 (RefSeq)
macaque, rhesus TRAFD1 711635 (Entrez Gene)
Chr11 NP_001253436 (RefSeq)
NM_001266507 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory