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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDGFRA HGNC:8803 (HGNC)
5156 (Entrez Gene)
173490 (OMIM)
PDGFRA (MyGene.info)
HGNC homology
Chr4 q12 Chr4:54229097-54298245 (+)
gastrointestinal stromal tumor
P16234 (UniProt | EBI)
NM_006206 (RefSeq)
mouse Pdgfra MGI:97530 (MGI)
18595 (Entrez Gene)
Gene Tree
HGNC homology
Chr5 39.55 cM Chr5:75152292-75198215 (+)
congenital diaphragmatic hernia
OTTMUSG00000056081 (VEGA)
OTTMUSP00000072850 (VEGA)
OTTMUST00000138650 (VEGA)
rat Pdgfra 25267 (Entrez Gene)
Chr14 P20786 (UniProt | EBI)
NM_012802 (RefSeq)
chimpanzee PDGFRA 461318 (Entrez Gene)
Chr4 XP_024211921 (RefSeq)
cattle PDGFRA 282301 (Entrez Gene)
Chr6 NP_001179274 (RefSeq)
NM_001192345 (RefSeq)
dog PDGFRA 442860 (Entrez Gene)
Chr13 XP_005628253 (RefSeq)
chicken PDGFRA 395509 (Entrez Gene)
Chr4 Q9PUF6 (UniProt | EBI)
NM_204749 (RefSeq)
zebrafish pdgfra 386856 (Entrez Gene)
Chr20 Q9DE49 (UniProt | EBI)
NM_131459 (RefSeq)
frog, western clawed pdgfra 100124862 (Entrez Gene)
Chr1 NP_001096290 (RefSeq)
NM_001102820 (RefSeq)
macaque, rhesus PDGFRA 697002 (Entrez Gene)
Chr5 XP_014994177 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory