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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
31361

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDGFRA HGNC:8803 (HGNC)
5156 (Entrez Gene)
173490 (OMIM)
Chr4 q12 Chr4:54229097-54298245 (+)
GRCh38
Gastrointestinal Stromal Tumor; GIST
Hypereosinophilic Syndrome, Idiopathic; HES
P16234 (UniProt | EBI)
NM_006206 (RefSeq)
mouse Pdgfra MGI:97530 (MGI)
18595 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 39.55 cM Chr5:75152291-75198204 (+)
GRCm38
Diaphragmatic Hernia, Congenital
18595 (NCBI Gene Model)
P26618 (UniProt | EBI)
NM_001083316 (RefSeq)
rat Pdgfra 25267 (Entrez Gene)
Chr14 P20786 (UniProt | EBI)
NM_012802 (RefSeq)
chimpanzee PDGFRA 461318 (Entrez Gene)
Chr4 XP_003950404 (RefSeq)
rhesus macaque PDGFRA 697002 (Entrez Gene)
Chr5 XP_002808459 (RefSeq)
cattle PDGFRA 282301 (Entrez Gene)
Chr6 NP_001179274 (RefSeq)
NM_001192345 (RefSeq)
dog PDGFRA 442860 (Entrez Gene)
Chr13 XP_532374 (RefSeq)
chicken PDGFRA 395509 (Entrez Gene)
Chr4 Q9PUF6 (UniProt | EBI)
NM_204749 (RefSeq)
western clawed frog LOC100124862 100124862 (Entrez Gene)
ChrUN NP_001096290 (RefSeq)
NM_001102820 (RefSeq)
zebrafish pdgfra 386856 (Entrez Gene)
Chr20 Q9DE49 (UniProt | EBI)
NM_131459 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory