About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
31360

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human PAX9 HGNC:8623 (HGNC)
5083 (Entrez Gene)
167416 (OMIM)
Chr14 q13.3 Chr14:36657568-36677807 (+)
GRCh38
Tooth Agenesis, Selective, 3; STHAG3
P55771 (UniProt | EBI)
NM_006194 (RefSeq)
mouse Pax9 MGI:97493 (MGI)
18511 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 24.53 cM Chr12:56691767-56712707 (+)
GRCm38
Tooth Agenesis, Selective, 3; STHAG3
OTTMUSG00000023206 (VEGA)
OTTMUSP00000026953 (VEGA)
OTTMUST00000056158 (VEGA)
rat Pax9 362741 (Entrez Gene)
Chr6 q23 Q2L4T2 (UniProt | EBI)
NM_001039539 (RefSeq)
chimpanzee PAX9 737458 (Entrez Gene)
Chr14 Q2VL62 (UniProt | EBI)
rhesus macaque PAX9 100429091 (Entrez Gene)
Chr7 Q2VL61 (UniProt | EBI)
NM_001040417 (RefSeq)
cattle PAX9 540196 (Entrez Gene)
Chr21 NP_001179298 (RefSeq)
NM_001192369 (RefSeq)
dog PAX9 490654 (Entrez Gene)
Chr8 XP_005623393 (RefSeq)
chicken PAX9 395740 (Entrez Gene)
Chr5 P55166 (UniProt | EBI)
NM_204912 (RefSeq)
zebrafish pax9 30558 (Entrez Gene)
Chr17 NP_571373 (RefSeq)
NM_131298 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/23/2014
MGI 5.19
The Jackson Laboratory