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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
31353

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HDAC6 HGNC:14064 (HGNC)
10013 (Entrez Gene)
300272 (OMIM)
ChrX p11.23 ChrX:48801679-48824976 (+)
GRCh38
Chondrodysplasia with Platyspondyly, Distinctive Brachydactyly, Hydrocephaly, and Microphthalmia
Q9UBN7 (UniProt | EBI)
NM_006044 (RefSeq)
mouse Hdac6 MGI:1333752 (MGI)
15185 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 3.58 cM ChrX:7930120-7947889 (-)
GRCm38
OTTMUSG00000017170 (VEGA)
OTTMUSP00000018679 (VEGA)
OTTMUST00000041586 (VEGA)
rat Hdac6 84581 (Entrez Gene)
ChrX q13 XP_001057931 (RefSeq)
LOC100911205 100911205 (Entrez Gene)
ChrX XP_003752058 (RefSeq)
chimpanzee HDAC6 100610515 (Entrez Gene)
ChrX XP_003317503 (RefSeq)
rhesus macaque HDAC6 711363 (Entrez Gene)
ChrX NP_001181125 (RefSeq)
NM_001194196 (RefSeq)
cattle HDAC6 513602 (Entrez Gene)
ChrX NP_001092430 (RefSeq)
NM_001098960 (RefSeq)
dog HDAC6 480907 (Entrez Gene)
ChrX XP_855362 (RefSeq)
zebrafish hdac6 565482 (Entrez Gene)
Chr8 XP_693858 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory