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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human JMJD1C HGNC:12313 (HGNC)
221037 (Entrez Gene)
604503 (OMIM)
HGNC homology
Chr10 q21.3 Chr10:63167221-63522075 (-)
Q15652 (UniProt | EBI)
NM_001322254 (RefSeq)
mouse Jmjd1c MGI:1918614 (MGI)
108829 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 34.85 cM Chr10:67096327-67256326 (+)
108829 (NCBI Gene Model)
Q69ZK6 (UniProt | EBI)
NM_001242396 (RefSeq)
rat Jmjd1c 171120 (Entrez Gene)
Chr20 p11 NP_001178648 (RefSeq)
NM_001191719 (RefSeq)
chimpanzee JMJD1C 450489 (Entrez Gene)
Chr10 XP_016773870 (RefSeq)
cattle JMJD1C 781067 (Entrez Gene)
Chr28 NP_001178051 (RefSeq)
NM_001191122 (RefSeq)
dog JMJD1C 479221 (Entrez Gene)
Chr4 XP_005618981 (RefSeq)
chicken JMJD1C 423655 (Entrez Gene)
Chr6 NP_001186475 (RefSeq)
NM_001199546 (RefSeq)
zebrafish jmjd1cb 558436 (Entrez Gene)
Chr12 XP_009304789 (RefSeq)
frog, western clawed jmjd1c 100487525 (Entrez Gene)
Chr7 XP_017951112 (RefSeq)
macaque, rhesus JMJD1C 697630 (Entrez Gene)
Chr9 XP_028682430 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory