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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ASCL1 HGNC:738 (HGNC)
429 (Entrez Gene)
100790 (OMIM)
ASCL1 (MyGene.info)
HGNC homology
Chr12 q23.2 Chr12:102957674-102960516 (+)
congenital central hypoventilation syndrome
P50553 (UniProt | EBI)
NM_004316 (RefSeq)
mouse Ascl1 MGI:96919 (MGI)
17172 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 43.64 cM Chr10:87491041-87493660 (-)
17172 (NCBI Gene Model)
Q02067 (UniProt | EBI)
NM_008553 (RefSeq)
rat Ascl1 64186 (Entrez Gene)
Chr7 q13 P19359 (UniProt | EBI)
NM_022384 (RefSeq)
chimpanzee ASCL1 452184 (Entrez Gene)
Chr12 XP_016779546 (RefSeq)
cattle ASCL1 540473 (Entrez Gene)
Chr5 XP_002687686 (RefSeq)
dog ASCL1 482628 (Entrez Gene)
Chr15 XP_539745 (RefSeq)
zebrafish ascl1a 30466 (Entrez Gene)
Chr4 Q90259 (UniProt | EBI)
NM_131219 (RefSeq)
frog, western clawed ascl1 100490701 (Entrez Gene)
Chr3 XP_002944648 (RefSeq)
macaque, rhesus ASCL1 698820 (Entrez Gene)
Chr11 XP_001094978 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.13
The Jackson Laboratory