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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
31212

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CAPN5 HGNC:1482 (HGNC)
726 (Entrez Gene)
602537 (OMIM)
Chr11 q14 Chr11:77066945-77126155 (+)
GRCh38
Vitreoretinopathy, Neovascular Inflammatory; VRNI
O15484 (UniProt | EBI)
NM_004055 (RefSeq)
mouse Capn5 MGI:1100859 (MGI)
12337 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 53.57 cM Chr7:98121559-98178274 (-)
GRCm38
OTTMUSG00000022532 (VEGA)
OTTMUSP00000025702 (VEGA)
OTTMUST00000053964 (VEGA)
rat Capn5 171495 (Entrez Gene)
Chr1 q32 Q8R4C0 (UniProt | EBI)
NM_134461 (RefSeq)
chimpanzee CAPN5 451438 (Entrez Gene)
Chr11 XP_003313296 (RefSeq)
rhesus macaque LOC698077 698077 (Entrez Gene)
Chr14 XP_002799769 (RefSeq)
cattle CAPN5 536988 (Entrez Gene)
Chr15 NP_001179823 (RefSeq)
NM_001192894 (RefSeq)
dog CAPN5 485175 (Entrez Gene)
Chr21 XP_542293 (RefSeq)
chicken CAPN5 419086 (Entrez Gene)
Chr1 XP_417278 (RefSeq)
zebrafish capn5a 563346 (Entrez Gene)
Chr18 NP_001073476 (RefSeq)
NM_001080007 (RefSeq)
capn5b 100006332 (Entrez Gene)
Chr21 XP_001345114 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory