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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
31185

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPM1D HGNC:9277 (HGNC)
8493 (Entrez Gene)
605100 (OMIM)
Chr17 q23.2 Chr17:60600183-60666280 (+)
GRCh38
Breast Cancer
O15297 (UniProt | EBI)
NM_003620 (RefSeq)
mouse Ppm1d MGI:1858214 (MGI)
53892 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 51.34 cM Chr11:85311244-85347066 (+)
GRCm38
OTTMUSG00000001033 (VEGA)
OTTMUSP00000000998 (VEGA)
OTTMUST00000002063 (VEGA)
rat Ppm1d 287585 (Entrez Gene)
Chr10 q26 NP_001099295 (RefSeq)
NM_001105825 (RefSeq)
chimpanzee PPM1D 454803 (Entrez Gene)
Chr17 NP_001233479 (RefSeq)
NM_001246550 (RefSeq)
rhesus macaque PPM1D 713045 (Entrez Gene)
Chr16 NP_001247765 (RefSeq)
NM_001260836 (RefSeq)
cattle PPM1D 514005 (Entrez Gene)
Chr19 NP_001178373 (RefSeq)
NM_001191444 (RefSeq)
dog PPM1D 612934 (Entrez Gene)
Chr9 XP_852759 (RefSeq)
chicken PPM1D 417644 (Entrez Gene)
Chr19 XP_415890 (RefSeq)
western clawed frog ppm1d 100489786 (Entrez Gene)
ChrUN XP_002933883 (RefSeq)
zebrafish ppm1da 394065 (Entrez Gene)
Chr15 NP_957384 (RefSeq)
NM_201090 (RefSeq)
ppm1db 492468 (Entrez Gene)
Chr5 NP_001007341 (RefSeq)
NM_001007340 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory