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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
30952

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATM HGNC:795 (HGNC)
472 (Entrez Gene)
607585 (OMIM)
Chr11 q22-q23 Chr11:108222832-108369102 (+)
GRCh38
Ataxia-Telangiectasia; AT
Breast Cancer
Q13315 (UniProt | EBI)
NM_000051 (RefSeq)
mouse Atm MGI:107202 (MGI)
11920 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 29.12 cM Chr9:53439149-53536740 (-)
GRCm38
Ataxia-Telangiectasia; AT
OTTMUSG00000031707 (VEGA)
OTTMUSP00000041767 (VEGA)
OTTMUST00000078538 (VEGA)
rat Atm 300711 (Entrez Gene)
Chr8 q24 NP_001100291 (RefSeq)
NM_001106821 (RefSeq)
chimpanzee ATM 451530 (Entrez Gene)
Chr11 XP_001139405 (RefSeq)
rhesus macaque ATM 100427400 (Entrez Gene)
Chr14 XP_002799825 (RefSeq)
cattle ATM 526824 (Entrez Gene)
Chr15 NP_001192864 (RefSeq)
NM_001205935 (RefSeq)
dog ATM 479450 (Entrez Gene)
Chr5 NP_001124300 (RefSeq)
NM_001130828 (RefSeq)
chicken ATM 395401 (Entrez Gene)
Chr1 NP_001155872 (RefSeq)
NM_001162400 (RefSeq)
western clawed frog atm 100490767 (Entrez Gene)
ChrUN XP_002934974 (RefSeq)
zebrafish atm 403064 (Entrez Gene)
Chr15 XP_002664603 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory