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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human APC HGNC:583 (HGNC)
324 (Entrez Gene)
611731 (OMIM)
Adenomatous polyposis coli (MyGene.info)
HGNC homology
Chr5 q22.2 Chr5:112707505-112846239 (+)
colorectal cancer
familial adenomatous polyposis
hepatocellular carcinoma
stomach cancer
P25054 (UniProt | EBI)
NM_001354899 (RefSeq)
mouse Apc MGI:88039 (MGI)
11789 (Entrez Gene)
Gene Tree
HGNC homology
Chr18 18.53 cM Chr18:34220924-34318608 (+)
breast cancer
colorectal cancer
familial adenomatous polyposis
hepatocellular carcinoma
ovarian cancer
prostate cancer
OTTMUSG00000035932 (VEGA)
OTTMUSP00000051004 (VEGA)
OTTMUST00000092329 (VEGA)
rat Apc 24205 (Entrez Gene)
Chr18 p12 P70478 (UniProt | EBI)
NM_012499 (RefSeq)
chimpanzee APC 461999 (Entrez Gene)
Chr5 XP_024212464 (RefSeq)
cattle APC 533233 (Entrez Gene)
Chr10 NP_001069454 (RefSeq)
NM_001075986 (RefSeq)
dog APC 479139 (Entrez Gene)
Chr3 XP_013967470 (RefSeq)
chicken APC 415607 (Entrez Gene)
ChrZ XP_004949342 (RefSeq)
zebrafish apc 386762 (Entrez Gene)
Chr10 NP_001137312 (RefSeq)
NM_001143840 (RefSeq)
frog, western clawed apc 779466 (Entrez Gene)
Chr1 XP_017945374 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory