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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
306

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TGM1 HGNC:11777 (HGNC)
7051 (Entrez Gene)
190195 (OMIM)
Chr14 q11.2 Chr14:24249114-24263210 (-)
GRCh38
Ichthyosis, Congenital, Autosomal Recessive 1; ARCI1
P22735 (UniProt | EBI)
NM_000359 (RefSeq)
mouse Tgm1 MGI:98730 (MGI)
21816 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 28.19 cM Chr14:55700009-55713492 (-)
GRCm38
Ichthyosis, Congenital, Autosomal Recessive 1; ARCI1
21816 (NCBI Gene Model)
Q9JLF6 (UniProt | EBI)
NM_001161715 (RefSeq)
rat Tgm1 60335 (Entrez Gene)
Chr15 p13 P23606 (UniProt | EBI)
NM_031659 (RefSeq)
chimpanzee TGM1 452814 (Entrez Gene)
Chr14 XP_001169496 (RefSeq)
rhesus macaque TGM1 715854 (Entrez Gene)
Chr7 XP_001113577 (RefSeq)
cattle TGM1 407997 (Entrez Gene)
Chr10 NP_001010991 (RefSeq)
NM_001010991 (RefSeq)
dog TGM1 403630 (Entrez Gene)
Chr8 Q9GLK0 (UniProt | EBI)
NM_001003079 (RefSeq)
zebrafish LOC793448 793448 (Entrez Gene)
Chr23 XP_001331914 (RefSeq)
LOC100334173 100334173 (Entrez Gene)
Chr23 XP_002665624 (RefSeq)
LOC100535918 100535918 (Entrez Gene)
Chr23 XP_003201279 (RefSeq)
si:ch1073-138d10.2 334438 (Entrez Gene)
Chr23 XP_005169495 (RefSeq)
tgm1l1 566581 (Entrez Gene)
Chr2 XP_694950 (RefSeq)
tgm1l2 793096 (Entrez Gene)
Chr23 XP_001332075 (RefSeq)
tgm1l4 555962 (Entrez Gene)
Chr23 NP_001025267 (RefSeq)
NM_001030096 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory