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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human EFEMP1 HGNC:3218 (HGNC)
2202 (Entrez Gene)
601548 (OMIM)
EFEMP1 (MyGene.info)
HGNC homology
Chr2 p16.1 Chr2:55865962-55924163 (-)
Doyne honeycomb retinal dystrophy
Q12805 (UniProt | EBI)
NM_001039349 (RefSeq)
mouse Efemp1 MGI:1339998 (MGI)
216616 (Entrez Gene)
Gene Tree
HGNC homology
Chr11 16.32 cM Chr11:28853204-28926743 (+)
Doyne honeycomb retinal dystrophy
OTTMUSG00000005315 (VEGA)
OTTMUSP00000005484 (VEGA)
OTTMUST00000011842 (VEGA)
rat Efemp1 305604 (Entrez Gene)
Chr14 q22 O35568 (UniProt | EBI)
NM_001012039 (RefSeq)
cattle EFEMP1 511566 (Entrez Gene)
Chr11 NP_001075186 (RefSeq)
NM_001081717 (RefSeq)
dog EFEMP1 474604 (Entrez Gene)
Chr10 XP_531834 (RefSeq)
chicken EFEMP1 428543 (Entrez Gene)
Chr3 XP_426097 (RefSeq)
zebrafish efemp1 100332567 (Entrez Gene)
Chr13 XP_017214396 (RefSeq)
frog, western clawed efemp1 100495975 (Entrez Gene)
Chr5 XP_002936872 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory