About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3028

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human EFEMP1 HGNC:3218 (HGNC)
2202 (Entrez Gene)
601548 (OMIM)
Chr2 p16 Chr2:55865962-55924163 (-)
GRCh38
Doyne Honeycomb Retinal Dystrophy; DHRD
Q12805 (UniProt | EBI)
NM_001039348 (RefSeq)
mouse Efemp1 MGI:1339998 (MGI)
216616 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 16.32 cM Chr11:28853204-28926743 (+)
GRCm38
Doyne Honeycomb Retinal Dystrophy; DHRD
OTTMUSG00000005315 (VEGA)
OTTMUSP00000005484 (VEGA)
OTTMUST00000011842 (VEGA)
rat Efemp1 305604 (Entrez Gene)
Chr14 q22 O35568 (UniProt | EBI)
NM_001012039 (RefSeq)
cattle EFEMP1 511566 (Entrez Gene)
Chr11 NP_001075186 (RefSeq)
NM_001081717 (RefSeq)
dog EFEMP1 474604 (Entrez Gene)
Chr10 XP_531834 (RefSeq)
chicken EFEMP1 428543 (Entrez Gene)
Chr3 XP_426097 (RefSeq)
western clawed frog efemp1 100495975 (Entrez Gene)
ChrUN XP_002936872 (RefSeq)
zebrafish LOC100332567 100332567 (Entrez Gene)
Chr13 XP_002664117 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/19/2014
MGI 5.19
The Jackson Laboratory