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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2968

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PAX2 HGNC:8616 (HGNC)
5076 (Entrez Gene)
167409 (OMIM)
Chr10 q24 Chr10:100745711-100829941 (+)
GRCh38
Papillorenal Syndrome; PAPRS
Renal Hypodysplasia/Aplasia 1; RHDA1
Q02962 (UniProt | EBI)
NM_000278 (RefSeq)
mouse Pax2 MGI:97486 (MGI)
18504 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 38.09 cM Chr19:44756049-44837870 (+)
GRCm38
Papillorenal Syndrome; PAPRS
OTTMUSG00000037630 (VEGA)
OTTMUSP00000054369 (VEGA)
OTTMUST00000097085 (VEGA)
rat Pax2 293992 (Entrez Gene)
Chr1 q54 NP_001099831 (RefSeq)
NM_001106361 (RefSeq)
chimpanzee PAX2 744540 (Entrez Gene)
Chr10 XP_001168808 (RefSeq)
rhesus macaque PAX2 710687 (Entrez Gene)
Chr9 XP_001108620 (RefSeq)
cattle PAX2 100297382 (Entrez Gene)
Chr26 XP_002698479 (RefSeq)
dog PAX2 609228 (Entrez Gene)
Chr28 XP_005637679 (RefSeq)
chicken PAX2 395574 (Entrez Gene)
Chr6 NP_990124 (RefSeq)
NM_204793 (RefSeq)
zebrafish pax2a 30425 (Entrez Gene)
Chr13 Q90268 (UniProt | EBI)
NM_131184 (RefSeq)
pax2b 60638 (Entrez Gene)
Chr12 NP_571715 (RefSeq)
NM_131640 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory