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Vertebrate Homology Class
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SOX9 HGNC:11204 (HGNC)
6662 (Entrez Gene)
608160 (OMIM)
Chr17 q24.3 Chr17:72121020-72126420 (+)
Campomelic Dysplasia
P48436 (UniProt | EBI)
NM_000346 (RefSeq)
mouse Sox9 MGI:98371 (MGI)
20682 (Entrez Gene)
Gene Tree
Chr11 77.27 cM Chr11:112782224-112787760 (+)
Campomelic Dysplasia
OTTMUSG00000003313 (VEGA)
OTTMUSP00000003300 (VEGA)
OTTMUST00000006937 (VEGA)
rat Sox9 140586 (Entrez Gene)
Chr10 q32.1 NP_536328 (RefSeq)
NM_080403 (RefSeq)
chimpanzee SOX9 450101 (Entrez Gene)
Chr17 Q9BG89 (UniProt | EBI)
NM_001009029 (RefSeq)
rhesus macaque SOX9 574208 (Entrez Gene)
Chr16 P61753 (UniProt | EBI)
NM_001032868 (RefSeq)
cattle SOX9 100336535 (Entrez Gene)
Chr19 XP_010814949 (RefSeq)
dog SOX9 403464 (Entrez Gene)
Chr9 Q7YRJ7 (UniProt | EBI)
NM_001002978 (RefSeq)
chicken SOX9 374148 (Entrez Gene)
Chr18 P48434 (UniProt | EBI)
NM_204281 (RefSeq)
western clawed frog sox9 549607 (Entrez Gene)
ChrUN Q6F2E7 (UniProt | EBI)
NM_001016853 (RefSeq)
zebrafish sox9a 60641 (Entrez Gene)
Chr12 NP_571718 (RefSeq)
NM_131643 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 5.21
The Jackson Laboratory