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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AP3D1 HGNC:568 (HGNC)
8943 (Entrez Gene)
607246 (OMIM)
AP3D1 (MyGene.info)
HGNC homology
Chr19 p13.3 Chr19:2100988-2151620 (-)
O14617 (UniProt | EBI)
NM_001077523 (RefSeq)
mouse Ap3d1 MGI:107734 (MGI)
11776 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 39.72 cM Chr10:80706956-80742264 (-)
Hermansky-Pudlak syndrome 1
Hermansky-Pudlak syndrome 2
platelet storage pool deficiency
ENSMUSG00000020198 (Ensembl Gene Model)
ENSMUSP00000020420 (Ensembl)
ENSMUST00000020420 (Ensembl)
rat Ap3d1 314633 (Entrez Gene)
Chr7 q11 NP_001094189 (RefSeq)
NM_001100719 (RefSeq)
chimpanzee AP3D1 455565 (Entrez Gene)
Chr19 XP_001149847 (RefSeq)
cattle AP3D1 281023 (Entrez Gene)
Chr7 q15 Q865S1 (UniProt | EBI)
NM_173998 (RefSeq)
dog AP3D1 476750 (Entrez Gene)
Chr20 XP_005633160 (RefSeq)
chicken AP3D1 420079 (Entrez Gene)
Chr28 XP_004948822 (RefSeq)
macaque, rhesus AP3D1 100430853 (Entrez Gene)
Chr19 XP_014977888 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory