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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2880

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SOCS2 HGNC:19382 (HGNC)
8835 (Entrez Gene)
605117 (OMIM)
SOCS2 (MyGene.info)
HGNC homology
Chr12 q22 Chr12:93569822-93626236 (+)
GRCh38.p7
O14508 (UniProt | EBI)
NM_001270467 (RefSeq)
mouse Socs2 MGI:1201787 (MGI)
216233 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr10 49.35 cM Chr10:95385362-95417180 (-)
GRCm38
ENSMUSG00000020027 (Ensembl Gene Model)
ENSMUSP00000121305 (Ensembl)
ENSMUST00000139210 (Ensembl)
rat Socs2 84607 (Entrez Gene)
Chr7 q13 O88582 (UniProt | EBI)
NM_058208 (RefSeq)
chimpanzee SOCS2 452127 (Entrez Gene)
Chr12 XP_009424276 (RefSeq)
cattle SOCS2 338437 (Entrez Gene)
Chr5 Q861R0 (UniProt | EBI)
NM_177523 (RefSeq)
dog SOCS2 100855737 (Entrez Gene)
Chr15 XP_022259018 (RefSeq)
chicken SOCS2 395219 (Entrez Gene)
Chr1 NP_989871 (RefSeq)
NM_204540 (RefSeq)
zebrafish socs2 562062 (Entrez Gene)
Chr4 NP_001108022 (RefSeq)
NM_001114550 (RefSeq)
frog, western clawed socs2 100151723 (Entrez Gene)
Chr3 NP_001120898 (RefSeq)
NM_001127426 (RefSeq)
macaque, rhesus SOCS2 715772 (Entrez Gene)
Chr11 NP_001181691 (RefSeq)
NM_001194762 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/12/2019
MGI 6.13
The Jackson Laboratory