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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
287

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC12A3 HGNC:10912 (HGNC)
6559 (Entrez Gene)
600968 (OMIM)
Chr16 q13 Chr16:56865207-56915850 (+)
GRCh38
Gitelman Syndrome
P55017 (UniProt | EBI)
NM_000339 (RefSeq)
mouse Slc12a3 MGI:108114 (MGI)
20497 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 46.46 cM Chr8:94329192-94366213 (+)
GRCm38
Gitelman Syndrome
ENSMUSG00000031766 (Ensembl Gene Model)
ENSMUSP00000034218 (Ensembl)
ENSMUST00000034218 (Ensembl)
rat Slc12a3 54300 (Entrez Gene)
Chr19 p14-p12 P55018 (UniProt | EBI)
NM_019345 (RefSeq)
chimpanzee SLC12A3 454108 (Entrez Gene)
Chr16 XP_001138088 (RefSeq)
rhesus macaque SLC12A3 703090 (Entrez Gene)
Chr20 XP_001093467 (RefSeq)
cattle SLC12A3 404171 (Entrez Gene)
Chr18 NP_001193107 (RefSeq)
NM_001206178 (RefSeq)
dog SLC12A3 478118 (Entrez Gene)
Chr2 XP_535292 (RefSeq)
chicken SLC12A3 415692 (Entrez Gene)
Chr11 XP_414059 (RefSeq)
western clawed frog slc12a3 100494755 (Entrez Gene)
ChrUN XP_002937217 (RefSeq)
zebrafish slc12a3 565439 (Entrez Gene)
Chr18 NP_001038545 (RefSeq)
NM_001045080 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory