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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2865

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human DPM1 HGNC:3005 (HGNC)
8813 (Entrez Gene)
603503 (OMIM)
Chr20 q13.13 Chr20:50934867-50958544 (-)
GRCh38
Congenital Disorder of Glycosylation, Type IE; CDG1E
O60762 (UniProt | EBI)
NM_003859 (RefSeq)
mouse Dpm1 MGI:1330239 (MGI)
13480 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 88.46 cM Chr2:168209048-168230591 (-)
GRCm38
OTTMUSG00000016047 (VEGA)
OTTMUSP00000017164 (VEGA)
OTTMUST00000038290 (VEGA)
rat Dpm1 296394 (Entrez Gene)
Chr3 q42 NP_001100014 (RefSeq)
NM_001106544 (RefSeq)
chimpanzee DPM1 745025 (Entrez Gene)
Chr20 XP_001168296 (RefSeq)
rhesus macaque DPM1 701283 (Entrez Gene)
Chr10 XP_001094366 (RefSeq)
cattle DPM1 534097 (Entrez Gene)
Chr13 Q1JQ93 (UniProt | EBI)
NM_001076013 (RefSeq)
dog DPM1 477264 (Entrez Gene)
Chr24 XP_867215 (RefSeq)
chicken DPM1 419349 (Entrez Gene)
Chr20 XP_417511 (RefSeq)
western clawed frog dpm1 496884 (Entrez Gene)
ChrUN NP_001011407 (RefSeq)
NM_001011407 (RefSeq)
zebrafish dpm1 445202 (Entrez Gene)
Chr23 NP_001003596 (RefSeq)
NM_001003596 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory