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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
286

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC12A1 HGNC:10910 (HGNC)
6557 (Entrez Gene)
600839 (OMIM)
Chr15 q15-q21.1 Chr15:48206301-48304078 (+)
GRCh38
Bartter Syndrome, Antenatal, Type 1
Q13621 (UniProt | EBI)
NM_000338 (RefSeq)
mouse Slc12a1 MGI:103150 (MGI)
20495 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 61.23 cM Chr2:125152505-125230002 (+)
GRCm38
Bartter Syndrome, Antenatal, Type 1
OTTMUSG00000015338 (VEGA)
OTTMUSP00000016335 (VEGA)
OTTMUST00000036349 (VEGA)
rat Slc12a1 25065 (Entrez Gene)
Chr3 q36 P55016 (UniProt | EBI)
NM_019134 (RefSeq)
chimpanzee SLC12A1 453410 (Entrez Gene)
Chr15 NP_001104309 (RefSeq)
NM_001110839 (RefSeq)
rhesus macaque SLC12A1 714289 (Entrez Gene)
Chr7 XP_001112900 (RefSeq)
cattle SLC12A1 407161 (Entrez Gene)
Chr10 XP_002690982 (RefSeq)
dog SLC12A1 478292 (Entrez Gene)
Chr30 XP_535467 (RefSeq)
chicken SLC12A1 415433 (Entrez Gene)
Chr10 XP_413814 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory