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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
27970

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TGM6 HGNC:16255 (HGNC)
343641 (Entrez Gene)
613900 (OMIM)
Chr20 p13 Chr20:2380908-2432753 (+)
GRCh38
Spinocerebellar Ataxia 35; SCA35
O95932 (UniProt | EBI)
NM_198994 (RefSeq)
mouse Tgm6 MGI:3044321 (MGI)
241636 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 63.19 cM Chr2:130112416-130154232 (+)
GRCm38
OTTMUSG00000015503 (VEGA)
OTTMUSP00000016517 (VEGA)
OTTMUST00000036815 (VEGA)
rat Tgm6 296152 (Entrez Gene)
Chr3 q36 XP_008760458 (RefSeq)
chimpanzee TGM6 458044 (Entrez Gene)
Chr20 XP_009435075 (RefSeq)
cattle TGM6 536356 (Entrez Gene)
Chr13 XP_616484 (RefSeq)
dog TGM6 485807 (Entrez Gene)
Chr24 XP_005634932 (RefSeq)
chicken TGM6 771144 (Entrez Gene)
Chr20 XP_001234442 (RefSeq)
western clawed frog LOC101730677 101730677 (Entrez Gene)
ChrUN XP_004918707 (RefSeq)
zebrafish LOC559691 559691 (Entrez Gene)
Chr6 XP_009301053 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory