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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCDC40 HGNC:26090 (HGNC)
55036 (Entrez Gene)
613799 (OMIM)
HGNC homology
Chr17 q25.3 Chr17:80036632-80100613 (+)
primary ciliary dyskinesia 15
Q4G0X9 (UniProt | EBI)
NM_001330508 (RefSeq)
mouse Ccdc40 MGI:2443893 (MGI)
207607 (Entrez Gene)
Gene Tree
HGNC homology
Chr11 83.35 cM Chr11:119228572-119265236 (+)
OTTMUSG00000004002 (VEGA)
OTTMUSP00000004338 (VEGA)
OTTMUST00000008889 (VEGA)
rat Ccdc40 287867 (Entrez Gene)
Chr10 q32.3 NP_001128160 (RefSeq)
NM_001134688 (RefSeq)
chimpanzee CCDC40 454938 (Entrez Gene)
Chr17 XP_511721 (RefSeq)
cattle CCDC40 529788 (Entrez Gene)
Chr19 XP_010814878 (RefSeq)
dog CCDC40 483351 (Entrez Gene)
Chr9 XP_005624081 (RefSeq)
chicken CCDC40 422083 (Entrez Gene)
Chr18 XP_024997485 (RefSeq)
zebrafish ccdc40 568590 (Entrez Gene)
Chr6 Q56A40 (UniProt | EBI)
NM_001271813 (RefSeq)
frog, western clawed ccdc40 100486955 (Entrez Gene)
ChrUN XP_002937644 (RefSeq)
macaque, rhesus CCDC40 717836 (Entrez Gene)
Chr16 XP_014975984 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory