About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
27890

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human CCDC40 HGNC:26090 (HGNC)
55036 (Entrez Gene)
613799 (OMIM)
Chr17 q25.3 Chr17:80036632-80100613 (+)
GRCh38
Ciliary Dyskinesia, Primary, 15; CILD15
Q4G0X9 (UniProt | EBI)
NM_017950 (RefSeq)
mouse Ccdc40 MGI:2443893 (MGI)
207607 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 83.35 cM Chr11:119228572-119265236 (+)
GRCm38
OTTMUSG00000004002 (VEGA)
OTTMUSP00000004338 (VEGA)
OTTMUST00000008889 (VEGA)
rat Ccdc40 287867 (Entrez Gene)
Chr10 q32.3 NP_001128160 (RefSeq)
NM_001134688 (RefSeq)
chimpanzee CCDC40 454938 (Entrez Gene)
Chr17 XP_511721 (RefSeq)
rhesus macaque CCDC40 717836 (Entrez Gene)
Chr16 XP_001109774 (RefSeq)
cattle CCDC40 529788 (Entrez Gene)
Chr19 XP_608246 (RefSeq)
dog CCDC40 483351 (Entrez Gene)
Chr9 XP_005624081 (RefSeq)
chicken CCDC40 422083 (Entrez Gene)
Chr18 XP_420086 (RefSeq)
western clawed frog LOC100486955 100486955 (Entrez Gene)
ChrUN XP_002937644 (RefSeq)
zebrafish ccdc40 568590 (Entrez Gene)
Chr6 Q56A40 (UniProt | EBI)
NM_001271813 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/09/2014
MGI 5.20
The Jackson Laboratory