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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
27775

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A17 HGNC:31399 (HGNC)
388662 (Entrez Gene)
610299 (OMIM)
HGNC homology
Chr1 p13.3 Chr1:110150510-110202202 (+)
GRCh38.p7
Q9H1V8 (UniProt | EBI)
NM_001010898 (RefSeq)
mouse Slc6a17 MGI:2442535 (MGI)
229706 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 46.83 cM Chr3:107467548-107518018 (-)
GRCm38
229706 (NCBI Gene Model)
Q8BJI1 (UniProt | EBI)
NM_001293689 (RefSeq)
rat Slc6a17 613226 (Entrez Gene)
Chr2 P31662 (UniProt | EBI)
NM_001033079 (RefSeq)
chimpanzee SLC6A17 457123 (Entrez Gene)
Chr1 XP_016781369 (RefSeq)
cattle SLC6A17 407174 (Entrez Gene)
Chr3 Q28001 (UniProt | EBI)
NM_001166573 (RefSeq)
dog SLC6A17 490115 (Entrez Gene)
Chr6 XP_013970229 (RefSeq)
chicken SLC6A17 419805 (Entrez Gene)
Chr26 XP_015154635 (RefSeq)
zebrafish slc6a17 798635 (Entrez Gene)
Chr8 NP_001243653 (RefSeq)
NM_001256724 (RefSeq)
frog, western clawed slc6a17 100490416 (Entrez Gene)
Chr2 XP_031752727 (RefSeq)
macaque, rhesus SLC6A17 701162 (Entrez Gene)
Chr1 XP_001099500 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory