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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDLIM4 HGNC:16501 (HGNC)
8572 (Entrez Gene)
603422 (OMIM)
PDLIM4 (MyGene.info)
HGNC homology
Chr5 q31.1 Chr5:132257658-132273454 (+)
P50479 (UniProt | EBI)
NM_003687 (RefSeq)
mouse Pdlim4 MGI:1353470 (MGI)
30794 (Entrez Gene)
Gene Tree
HGNC homology
Chr11 32.13 cM Chr11:54054928-54069014 (-)
OTTMUSG00000005656 (VEGA)
OTTMUSP00000005828 (VEGA)
OTTMUST00000012586 (VEGA)
rat Pdlim4 24915 (Entrez Gene)
Chr10 P36202 (UniProt | EBI)
NM_017062 (RefSeq)
chimpanzee PDLIM4 462048 (Entrez Gene)
Chr5 XP_001163139 (RefSeq)
cattle PDLIM4 515410 (Entrez Gene)
Chr7 Q3T005 (UniProt | EBI)
NM_001034491 (RefSeq)
dog PDLIM4 481498 (Entrez Gene)
Chr11 XP_022280975 (RefSeq)
chicken PDLIM4 395643 (Entrez Gene)
Chr13 Q9PW72 (UniProt | EBI)
NM_204839 (RefSeq)
zebrafish pdlim4 569404 (Entrez Gene)
Chr21 NP_001036161 (RefSeq)
NM_001042696 (RefSeq)
frog, western clawed pdlim4 394862 (Entrez Gene)
Chr3 NP_989251 (RefSeq)
NM_203920 (RefSeq)
macaque, rhesus PDLIM4 707372 (Entrez Gene)
Chr6 NP_001244732 (RefSeq)
NM_001257803 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory