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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2724

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TCAP HGNC:11610 (HGNC)
8557 (Entrez Gene)
604488 (OMIM)
HGNC homology
Chr17 q12 Chr17:39665346-39666554 (+)
GRCh38.p2
Cardiomyopathy, Familial Hypertrophic, 25; CMH25
Muscular Dystrophy, Limb-Girdle, Type 2G; LGMD2G
O15273 (UniProt | EBI)
NM_003673 (RefSeq)
mouse Tcap MGI:1330233 (MGI)
21393 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 61.75 cM Chr11:98383811-98384953 (+)
GRCm38
Muscular Dystrophy, Limb-Girdle, Type 2G; LGMD2G
OTTMUSG00000002713 (VEGA)
OTTMUSP00000002542 (VEGA)
OTTMUST00000005375 (VEGA)
chimpanzee TCAP 454633 (Entrez Gene)
Chr17 XP_009430548 (RefSeq)
rhesus macaque TCAP 697327 (Entrez Gene)
Chr16 NP_001253761 (RefSeq)
NM_001266832 (RefSeq)
cattle TCAP 513257 (Entrez Gene)
Chr19 Q6T8D8 (UniProt | EBI)
NM_001014915 (RefSeq)
dog TCAP 608508 (Entrez Gene)
Chr9 NP_001128597 (RefSeq)
NM_001135125 (RefSeq)
western clawed frog tcap 100380097 (Entrez Gene)
ChrUN XP_002940414 (RefSeq)
zebrafish tcap 556258 (Entrez Gene)
Chr3 NP_001292500 (RefSeq)
NM_001305571 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory