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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2716

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AGPS HGNC:327 (HGNC)
8540 (Entrez Gene)
603051 (OMIM)
Chr2 q31.2 Chr2:177392743-177543836 (+)
GRCh38
Rhizomelic Chondrodysplasia Punctata, Type 3; RCDP3
O00116 (UniProt | EBI)
NM_003659 (RefSeq)
mouse Agps MGI:2443065 (MGI)
228061 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 44.77 cM Chr2:75832177-75931350 (+)
GRCm38
Rhizomelic Chondrodysplasia Punctata, Type 3; RCDP3
OTTMUSG00000013293 (VEGA)
OTTMUSP00000014280 (VEGA)
OTTMUST00000032119 (VEGA)
rat Agps 84114 (Entrez Gene)
Chr3 q23 Q9EQR2 (UniProt | EBI)
NM_053350 (RefSeq)
chimpanzee AGPS 740316 (Entrez Gene)
Chr2B XP_001154159 (RefSeq)
rhesus macaque AGPS 702139 (Entrez Gene)
Chr12 XP_002799004 (RefSeq)
cattle AGPS 613679 (Entrez Gene)
Chr2 NP_001193648 (RefSeq)
NM_001206719 (RefSeq)
dog AGPS 488421 (Entrez Gene)
Chr36 XP_545543 (RefSeq)
chicken AGPS 424135 (Entrez Gene)
Chr7 XP_421987 (RefSeq)
zebrafish agps 386801 (Entrez Gene)
Chr9 NP_956407 (RefSeq)
NM_200113 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory