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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
27056

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CFAP53 HGNC:26530 (HGNC)
220136 (Entrez Gene)
614759 (OMIM)
Chr18 q21.1 Chr18:50227193-50266495 (-)
GRCh38
Heterotaxy, Visceral, 6, Autosomal; HTX6
Q96M91 (UniProt | EBI)
NM_145020 (RefSeq)
mouse Ccdc11 MGI:1921703 (MGI)
74453 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 50.7 cM Chr18:74283090-74359986 (+)
GRCm38
OTTMUSG00000039801 (VEGA)
OTTMUSP00000057809 (VEGA)
OTTMUST00000103460 (VEGA)
rat Ccdc11 364899 (Entrez Gene)
Chr18 q12.2 XP_001053914 (RefSeq)
chimpanzee CCDC11 468534 (Entrez Gene)
Chr18 NP_001267032 (RefSeq)
NM_001280103 (RefSeq)
rhesus macaque CCDC11 700084 (Entrez Gene)
Chr18 XP_001091617 (RefSeq)
dog CCDC11 490567 (Entrez Gene)
Chr7 XP_547689 (RefSeq)
western clawed frog ccdc11 100145337 (Entrez Gene)
ChrUN NP_001120281 (RefSeq)
NM_001126809 (RefSeq)
zebrafish ccdc11 567344 (Entrez Gene)
Chr21 NP_001038595 (RefSeq)
NM_001045130 (RefSeq)
LOC101883738 101883738 (Entrez Gene)
Chr21 XP_005161304 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory