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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
27031

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SCLT1 HGNC:26406 (HGNC)
132320 (Entrez Gene)
611399 (OMIM)
HGNC homology
Chr4 q28.2 Chr4:128875206-129093607 (-)
GRCh38.p7
Q96NL6 (UniProt | EBI)
NM_144643 (RefSeq)
mouse Sclt1 MGI:1914411 (MGI)
67161 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 19.91 cM Chr3:41626720-41742514 (-)
GRCm38
autosomal recessive polycystic kidney disease
ciliopathy
ENSMUSG00000059834 (Ensembl Gene Model)
ENSMUSP00000026866 (Ensembl)
ENSMUST00000026866 (Ensembl)
rat Sclt1 266809 (Entrez Gene)
Chr2 q25 Q8CJ99 (UniProt | EBI)
NM_153740 (RefSeq)
chimpanzee SCLT1 461486 (Entrez Gene)
Chr4 XP_016807704 (RefSeq)
cattle SCLT1 534830 (Entrez Gene)
Chr17 XP_024833348 (RefSeq)
dog SCLT1 483829 (Entrez Gene)
Chr19 XP_022261637 (RefSeq)
chicken SCLT1 422486 (Entrez Gene)
Chr4 XP_025006164 (RefSeq)
zebrafish sclt1 561057 (Entrez Gene)
Chr1 XP_005159869 (RefSeq)
frog, western clawed sclt1 100379684 (Entrez Gene)
Chr1 NP_001186859 (RefSeq)
NM_001199930 (RefSeq)
macaque, rhesus SCLT1 693822 (Entrez Gene)
Chr5 NP_001245093 (RefSeq)
NM_001258164 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory